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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
17
pCHi-C
8
total RNA-seq
5
ATAC-seq
Assay category
154
DNA binding
8
Transcription
5
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
184
May, 2021
24
May, 2022
23
February, 2023
16
January, 2021
Available data
175
bigWig
135
bam
114
bed narrowPeak
84
tagAlign
tsv
2
bed bed3+
Organism
184
Homo sapiens
Biosample type
135
primary cell
47
in vitro differentiated cells
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
pancreas
1
thymus
Project
101
T1D
83
AMP
Genome assembly (visualization)
124
hg19
84
GRCh38
Lab
184
Kyle Gaulton, UCSD
42
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
184 results
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ChIP-seq
pCHi-C
total RNA-seq
ATAC-seq
primary cell
monocyte
84
1
CD8-positive, alpha-beta T cell
33
1
2
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
37
5
5
tissue
pancreas
1
thymus
1
See all biosamples
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