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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
46
ATAC-seq
Hi-C
4
DNase-seq
2
WGBS
1
FAIRE-seq
Assay category
99
DNA binding
51
DNA accessibility
2
DNA methylation
Target of assay
70
histone
70
histone modification
45
broad histone mark
25
narrow histone mark
21
control
8
transcription factor
4
RNA binding protein
Date released
50
May, 2019
46
October, 2019
35
February, 2023
14
February, 2021
June, 2019
4
July, 2019
3
November, 2017
Available data
175
bam
143
bigWig
124
bed narrowPeak
74
bigBed narrowPeak
tsv
8
bed broadPeak
8
bigBed broadPeak
6
tagAlign
4
bed bed3+
3
fastq
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
152
Homo sapiens
Biosample type
115
tissue
23
primary cell
14
cell line
Organ
611
liver
516
pancreas
340
epithelium
248
kidney
227
brain
187
connective tissue
187
heart
156
vasculature
152
blood vessel
101
bone element
89
adipose tissue
81
artery
79
limb
69
blood
69
bodily fluid
49
eye
38
musculature of body
38
nerve
24
spleen
23
embryo
20
vein
19
lung
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
152
AMP
Genome assembly (visualization)
124
GRCh38
92
hg19
Lab
152
AMP-T2D consortium
files.file_type!
tsv
month_released!
June, 2019
assay_title!
Hi-C
BIOSAMPLE
ASSAY
152 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
WGBS
FAIRE-seq
tissue
coronary artery
5
36
tibial artery
23
1
2
thoracic aorta
16
1
ascending aorta
16
aorta
13
2
primary cell
endothelial cell of umbilical vein
17
2
1
brain microvascular endothelial cell
3
cell line
smooth muscle cell of the coronary artery
6
8
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