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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
13
single cell RNA-seq
8
ChIP-seq
2
pCHi-C
Assay category
DNA accessibility
13
Transcription
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
311
August, 2017
265
October, 2019
192
May, 2021
120
May, 2019
114
August, 2021
107
February, 2021
101
May, 2022
96
February, 2023
94
December, 2017
80
April, 2019
78
November, 2018
74
October, 2018
56
September, 2020
52
May, 2020
47
September, 2023
35
December, 2018
35
July, 2019
33
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
17
March, 2020
15
November, 2019
15
October, 2017
10
November, 2020
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
July, 2018
4
May, 2023
4
October, 2022
1
August, 2018
1
December, 2019
1
March, 2019
Available data
tsv
554
bam
550
bigWig
89
txt
18
fastq
8
tagAlign
6
csv
5
bed narrowPeak
2
bed bed3+
Organism
107
Homo sapiens
Biosample type
85
tissue
13
primary cell
9
cell line
Organ
84
bone element
6
artery
6
blood vessel
6
heart
6
vasculature
2
liver
1
connective tissue
Project
95
AMP
12
HPAP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
95
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
files.file_type!
tsv
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
107 results
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Clear Filters
RNA microarray
single cell RNA-seq
ChIP-seq
pCHi-C
tissue
bone element
84
liver
1
primary cell
Langerhans cell
12
osteoblast
1
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
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