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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
402
ChIP-seq
Assay category
402
DNA binding
Target of assay
240
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
35
RNA binding protein
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
402
November, 2017
321
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
84
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
388
bam
330
bigWig
320
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
402
Homo sapiens
Biosample type
311
cell line
82
tissue
9
primary cell
Organ
311
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
402
AMP
Genome assembly (visualization)
278
GRCh38
277
hg19
Lab
402
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
21
inconsistent control read length
inconsistent control run_type
files.file_type!
tsv
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
402 results
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Clear Filters
ChIP-seq
cell line
HepG2
311
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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