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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
5
ATAC-seq
Assay category
43
DNA binding
5
DNA accessibility
Target of assay
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
11
transcription factor
8
control
2
RNA binding protein
1
chromatin remodeller
Date released
68
August, 2017
53
May, 2021
43
December, 2017
35
August, 2021
24
February, 2018
16
February, 2023
6
October, 2019
5
November, 2019
4
February, 2021
4
January, 2018
4
March, 2020
1
August, 2018
Available data
48
bam
43
fastq
39
bed narrowPeak
34
bigWig
14
bigBed narrowPeak
12
bed bed3+
Organism
48
Homo sapiens
Biosample type
69
tissue
48
in vitro differentiated cells
15
cell line
3
stem cell
Organ
19
epithelium
15
liver
13
embryo
Project
48
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
48
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
9
inconsistent control read length
files.file_type!
tsv
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
ATAC-seq
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
Hepatic endoderm
4
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