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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
1
Hi-C
1
pCHi-C
Assay category
25
DNA accessibility
1
3D chromatin structure
Date released
322
August, 2017
272
October, 2019
218
June, 2019
209
May, 2021
200
May, 2022
183
February, 2023
169
August, 2021
152
May, 2020
138
February, 2021
120
May, 2019
94
December, 2017
91
November, 2017
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
40
May, 2024
27
November, 2018
26
November, 2019
24
February, 2018
23
October, 2017
19
April, 2020
17
March, 2020
16
January, 2021
15
May, 2023
11
September, 2017
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
6
November, 2020
5
March, 2019
4
July, 2018
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
47
bam
25
bed narrowPeak
22
bigWig
tsv
4
fastq
2
bedpe bed3+
1
hic
Organism
27
Homo sapiens
Biosample type
21
tissue
cell line
6
in vitro differentiated cells
Organ
20
pancreas
2
adipose tissue
2
connective tissue
Project
27
AMP
Genome assembly (visualization)
26
hg19
25
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
tsv
biosample_type!
cell line
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ATAC-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
white fat cell
1
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