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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
11
ChIP-seq
2
Hi-C
1
DNase-seq
Assay category
28
DNA accessibility
11
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
281
November, 2017
201
October, 2019
187
August, 2017
187
June, 2019
143
May, 2021
97
May, 2019
77
December, 2017
72
May, 2020
71
November, 2018
65
April, 2019
46
September, 2018
45
August, 2021
45
February, 2023
45
October, 2018
39
May, 2022
39
November, 2019
30
December, 2018
29
February, 2021
26
July, 2019
21
January, 2019
17
March, 2020
16
February, 2018
13
October, 2017
7
September, 2017
3
January, 2018
3
March, 2019
3
October, 2022
2
November, 2020
1
May, 2023
Available data
63
bam
39
bed narrowPeak
36
bigWig
tsv
2
bedpe bed3+
2
hic
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
41
Homo sapiens
Biosample type
21
tissue
13
cell line
5
in vitro differentiated cells
2
primary cell
Organ
33
pancreas
13
epithelium
3
connective tissue
1
adipose tissue
Project
41
AMP
Genome assembly (visualization)
41
hg19
39
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
DNase-seq
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
11
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
osteoblast
1
1
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