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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
13
ChIP-seq
5
Hi-C
1
MPRA
Assay category
26
DNA accessibility
13
DNA binding
5
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
59
bam
37
bed narrowPeak
31
bigWig
tsv
5
bedpe bed3+
5
hic
3
cool
1
txt
Organism
44
Homo sapiens
Biosample type
21
tissue
16
cell line
5
in vitro differentiated cells
3
primary cell
Organ
38
pancreas
18
epithelium
1
adipose tissue
1
connective tissue
Project
42
AMP
3
HPAP
Genome assembly (visualization)
42
hg19
37
GRCh38
Lab
42
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
21
inconsistent ontology term
3
audit script error
files.file_type!
tsv
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
MPRA
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
13
1
MIN6
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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