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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
8
total RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
77
DNA accessibility
9
Transcription
Date released
406
November, 2017
322
August, 2017
298
October, 2019
218
June, 2019
152
May, 2020
120
May, 2019
117
February, 2021
94
December, 2017
88
November, 2018
87
February, 2023
80
April, 2019
74
October, 2018
47
September, 2018
43
July, 2019
42
May, 2021
41
November, 2019
38
August, 2021
35
December, 2018
25
January, 2019
24
February, 2018
22
October, 2017
19
March, 2020
11
September, 2017
8
January, 2018
4
July, 2018
2
May, 2022
2
November, 2020
1
August, 2018
1
August, 2022
1
December, 2019
1
May, 2023
1
October, 2022
0
September, 2020
Available data
63
bed narrowPeak
tsv
10
bed bed3
4
bed bed3+
4
txt
Organism
86
Homo sapiens
Biosample type
73
tissue
13
in vitro differentiated cells
1
cell line
Organ
36
heart
35
artery
35
blood vessel
35
vasculature
27
eye
14
connective tissue
13
epithelium
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
pancreas
Project
87
AMP
Genome assembly (visualization)
42
hg19
35
GRCh38
Lab
135
Klaus Kaestner, Upenn
87
AMP-T2D consortium
23
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
coronary artery
35
retina
15
pigmented layer of retina
12
acetabular part of hip bone
1
1
ilium
1
1
+ See 5 more…
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
2
adipocyte
1
1
preadipocyte
1
1
cell line
EndoC_BH1
1
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