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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1811
ChIP-seq
516
ATAC-seq
212
DNase-seq
212
total RNA-seq
158
single cell RNA-seq
85
RNA microarray
76
snATAC-seq
69
WGBS
34
Hi-C
26
pCHi-C
21
RRBS
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA methylation
Date released
84
February, 2021
1
August, 2021
1
May, 2021
Available data
84
txt
tsv
Organism
85
Homo sapiens
Biosample type
85
tissue
1
primary cell
Organ
84
bone element
1
adipose tissue
1
connective tissue
Project
86
AMP
Lab
86
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
files.file_type!
tsv
organ_slims!
blood
BIOSAMPLE
ASSAY
86 results
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RNA microarray
DNAme array
tissue
bone element
84
subcutaneous adipose tissue
1
primary cell
monocyte
1
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