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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
WGBS
19
RRBS
1
DNAme array
Assay category
1279
DNA binding
789
DNA accessibility
353
Transcription
84
DNA methylation
30
3D chromatin structure
Date released
41
May, 2022
25
July, 2019
11
August, 2017
6
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
33
bed bedMethyl
33
bigBed bedMethyl
18
fastq
17
bam
16
bigWig
tsv
Organism
84
Homo sapiens
Biosample type
51
primary cell
33
tissue
Organ
47
epithelium
47
pancreas
10
heart
7
connective tissue
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
43
AMP
41
HPAP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
43
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
files.file_type!
tsv
organ_slims!
liver
BIOSAMPLE
ASSAY
84 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 11 more…
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