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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
41
WGBS
Assay category
177
Transcription
97
DNA accessibility
41
DNA methylation
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
59
September, 2020
39
February, 2021
7
August, 2020
Available data
169
fastq
153
zippedFastqFolder
10
bigWig
tsv
Organism
315
Homo sapiens
Biosample type
315
primary cell
Organ
143
epithelium
143
pancreas
Project
315
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
2374
AMP-T2D consortium
315
Klaus Kaestner, Upenn
247
Kyle Gaulton, UCSD
141
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
25
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
files.file_type!
tsv
organ_slims!
spleen
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
315 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
29
25
pancreatic beta cell
11
16
16
exocrine cell
39
pancreatic acinar cell
4
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