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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
34
DNase-seq
7
ATAC-seq
4
Hi-C
1
WGBS
Assay category
43
DNA binding
41
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
31
histone
31
histone modification
20
broad histone mark
12
control
11
narrow histone mark
Date released
39
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
88
bam
71
bed narrowPeak
70
bigWig
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
89
Homo sapiens
Biosample type
89
tissue
Organ
617
liver
478
pancreas
368
epithelium
330
kidney
260
brain
185
heart
183
connective tissue
vasculature
162
blood vessel
115
limb
101
bone element
87
musculature of body
83
artery
69
blood
69
bodily fluid
67
adipose tissue
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
89
AMP
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
89
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
organ_slims!
vasculature
month_released!
October, 2018
BIOSAMPLE
ASSAY
89 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
35
2
1
muscle of leg
7
13
1
muscle of arm
17
gastrocnemius medialis
4
distal epiphysis of femur
1
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