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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
38
ATAC-seq
5
DNase-seq
2
WGBS
1
Hi-C
Assay category
73
DNA binding
43
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
16
control
3
RNA binding protein
3
transcription factor
Date released
50
May, 2019
35
February, 2023
26
October, 2019
4
July, 2019
3
June, 2019
1
March, 2020
Available data
100
bed narrowPeak
87
bam
70
bigWig
62
bigBed narrowPeak
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
119
Homo sapiens
Biosample type
119
tissue
29
primary cell
14
cell line
Organ
287
kidney
242
brain
230
pancreas
207
liver
162
heart
119
blood vessel
119
vasculature
115
limb
100
bone element
90
connective tissue
89
adipose tissue
75
musculature of body
69
artery
51
eye
38
nerve
24
spleen
19
lung
18
ureter
16
skeleton
12
epithelium
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
119
AMP
Genome assembly (visualization)
101
GRCh38
66
hg19
Lab
119
AMP-T2D consortium
files.file_type!
tsv
BIOSAMPLE
ASSAY
119 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
WGBS
Hi-C
tissue
coronary artery
5
36
2
tibial artery
23
1
2
ascending aorta
16
1
thoracic aorta
16
1
aorta
13
2
1
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