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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
72
ATAC-seq
53
total RNA-seq
41
WGBS
18
DNase-seq
7
Hi-C
6
RRBS
1
FAIRE-seq
Assay category
72
DNA accessibility
Date released
39
May, 2022
14
September, 2018
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
1
October, 2019
Available data
39
zippedFastqFolder
32
bigWig
32
fastq
23
bam
23
bed narrowPeak
22
bigBed narrowPeak
Organism
72
Homo sapiens
Biosample type
72
primary cell
18
cell line
12
tissue
Organ
72
epithelium
71
pancreas
2
connective tissue
1
liver
Project
49
HPAP
23
AMP
Genome assembly (visualization)
33
GRCh38
23
hg19
Lab
49
Klaus Kaestner, Upenn
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
72 results
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ATAC-seq
primary cell
pancreatic alpha cell
35
pancreatic beta cell
23
pancreatic acinar cell
9
pancreatic ductal cell
4
Liver fetal (hepatocyte)
1
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