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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
13
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
13
November, 2019
2
March, 2020
1
May, 2021
1
October, 2019
Available data
50
bigWig
49
bam
tsv
15
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
1
hic
Organism
17
Homo sapiens
Biosample type
117
primary cell
18
in vitro differentiated cells
17
cell line
12
tissue
Organ
325
liver
55
blood
55
bodily fluid
24
pancreas
17
epithelium
12
artery
12
blood vessel
12
heart
12
vasculature
8
kidney
Project
15
AMP
2
T1D
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
files.file_type!
tsv
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
ATAC-seq
DNase-seq
Hi-C
cell line
EndoC_BH1
13
2
1
glomerular visceral epithelial cell
1
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