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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
14
total RNA-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
14
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
27
February, 2023
21
October, 2019
June, 2019
1
July, 2019
Available data
27
bed narrowPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
49
Homo sapiens
Biosample type
48
tissue
1
primary cell
Organ
615
liver
525
pancreas
348
epithelium
249
kidney
230
brain
188
connective tissue
161
vasculature
157
blood vessel
150
heart
101
bone element
89
adipose tissue
83
limb
81
artery
69
blood
69
bodily fluid
49
eye
44
musculature of body
38
nerve
24
spleen
23
embryo
22
vein
19
lung
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
49
AMP
Genome assembly (visualization)
28
hg19
Lab
49
AMP-T2D consortium
files.file_type!
tsv
month_released!
June, 2019
BIOSAMPLE
ASSAY
49 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
1
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