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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
14
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
Assay category
32
DNA accessibility
14
Transcription
5
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
21
October, 2019
7
June, 2019
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
55
Homo sapiens
Biosample type
51
tissue
4
primary cell
Organ
614
liver
527
pancreas
360
epithelium
325
kidney
253
brain
211
heart
204
connective tissue
161
vasculature
156
blood vessel
110
limb
bone element
90
adipose tissue
82
artery
81
musculature of body
69
blood
69
bodily fluid
55
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
thymus
Project
55
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
55
AMP-T2D consortium
files.file_type!
tsv
month_released!
July, 2019
organ_slims!
bone element
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
islet of Langerhans
1
14
2
4
retina
15
3
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
3
1
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