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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
14
total RNA-seq
4
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
14
Transcription
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
21
October, 2019
6
June, 2019
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
55
Homo sapiens
Biosample type
51
tissue
4
primary cell
Organ
559
liver
520
pancreas
360
epithelium
327
kidney
257
brain
214
heart
196
connective tissue
163
vasculature
158
blood vessel
115
limb
101
bone element
87
musculature of body
85
adipose tissue
82
artery
59
blood
59
bodily fluid
55
eye
38
nerve
24
spleen
23
embryo
22
vein
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
55
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
55
AMP-T2D consortium
files.file_type!
tsv
organ_slims!
lung
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
2
4
retina
15
3
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
2
1
1
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