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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
Hi-C
Assay category
66
DNA binding
44
DNA accessibility
4
3D chromatin structure
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
4
July, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
tsv
bed bedMethyl
1
bigBed bedMethyl
Organism
114
Homo sapiens
Biosample type
114
tissue
Organ
614
liver
523
pancreas
362
epithelium
326
kidney
258
brain
203
connective tissue
177
heart
166
vasculature
161
blood vessel
114
limb
101
bone element
88
adipose tissue
83
artery
83
musculature of body
69
blood
69
bodily fluid
55
eye
38
nerve
23
embryo
22
spleen
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
thymus
Project
114
AMP
Genome assembly (visualization)
92
hg19
91
GRCh38
Lab
114
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
bed bedMethyl
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
muscle of arm
17
gastrocnemius medialis
4
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