Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
38
DNase-seq
8
ATAC-seq
6
Hi-C
1
FAIRE-seq
1
WGBS
Assay category
83
DNA binding
47
DNA accessibility
6
3D chromatin structure
1
DNA methylation
Target of assay
64
histone
64
histone modification
43
broad histone mark
21
narrow histone mark
19
control
Date released
86
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
5
July, 2019
1
March, 2020
Available data
134
bam
106
bigWig
105
bed narrowPeak
97
bigBed narrowPeak
40
bed broadPeak
40
bigBed broadPeak
38
bed bed3+
tsv
2
hic
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
Organism
137
Homo sapiens
Biosample type
115
tissue
22
primary cell
Organ
617
liver
529
pancreas
368
epithelium
330
kidney
260
brain
206
connective tissue
185
heart
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
137
AMP
Genome assembly (visualization)
109
hg19
104
GRCh38
Lab
137
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
137 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
FAIRE-seq
WGBS
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
1
muscle of arm
17
gastrocnemius medialis
4
+ See 9 more…
primary cell
endothelial cell of umbilical vein
17
2
2
1
See all biosamples
Download