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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
8
snATAC-seq
2
ATAC-seq
Assay category
65
DNA binding
10
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
6
histone
6
histone modification
6
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
8
January, 2021
6
October, 2019
1
January, 2018
Available data
61
bam
60
fastq
56
bigWig
55
bed narrowPeak
54
bigBed narrowPeak
1
tagAlign
tsv
Organism
75
Homo sapiens
Biosample type
61
cell line
8
primary cell
6
tissue
Organ
617
liver
529
pancreas
368
epithelium
330
kidney
260
brain
225
heart
206
connective tissue
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
67
AMP
8
T1D
Genome assembly (visualization)
56
hg19
55
GRCh38
Lab
67
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.file_type!
tsv
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
60
1
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
4
1
pituitary gland
1
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