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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
199
ChIP-seq
150
ATAC-seq
71
total RNA-seq
45
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
45
DNA methylation
Date released
41
May, 2022
4
November, 2018
Available data
41
zippedFastqFolder
10
fastq
tsv
4
bam
4
bed bedMethyl
4
bigBed bedMethyl
4
bigWig
Organism
45
Homo sapiens
Biosample type
41
primary cell
4
tissue
Organ
45
pancreas
41
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
41
HPAP
4
AMP
Genome assembly (visualization)
4
GRCh38
Lab
41
Klaus Kaestner, Upenn
4
AMP-T2D consortium
files.file_type!
tsv
tagAlign
BIOSAMPLE
ASSAY
45 results
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WGBS
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
tissue
body of pancreas
2
pancreas
2
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