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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
94
DNA binding
5
DNA accessibility
Target of assay
66
histone
66
histone modification
34
narrow histone mark
32
broad histone mark
21
control
7
transcription factor
2
RNA binding protein
Date released
104
May, 2022
99
August, 2017
56
February, 2023
51
October, 2018
46
September, 2018
35
November, 2019
21
May, 2021
19
September, 2020
18
October, 2019
11
September, 2017
10
November, 2020
8
January, 2021
8
March, 2020
7
August, 2020
7
November, 2018
5
March, 2019
5
October, 2017
4
July, 2018
4
June, 2019
3
August, 2021
3
October, 2022
2
July, 2019
2
May, 2019
1
August, 2022
Available data
168
bam
168
fastq
159
bigWig
tsv
49
bed narrowPeak
19
bed bed3+
17
bigBed narrowPeak
16
tagAlign
12
bed broadPeak
Organism
92
Homo sapiens
Biosample type
58
tissue
41
primary cell
Organ
125
connective tissue
99
pancreas
57
adipose tissue
54
liver
29
epithelium
26
musculature of body
Project
99
AMP
Genome assembly (visualization)
70
hg19
63
GRCh38
Lab
99
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
files.file_type!
tsv
BIOSAMPLE
ASSAY
99 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
1
1
pancreas
14
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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