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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
1
DNase-seq
1
FAIRE-seq
Assay category
56
DNA binding
2
DNA accessibility
Target of assay
40
histone
40
histone modification
22
broad histone mark
18
narrow histone mark
9
control
7
transcription factor
2
RNA binding protein
Date released
58
August, 2017
51
October, 2018
35
November, 2019
24
May, 2022
21
May, 2021
19
February, 2023
18
October, 2019
10
November, 2020
8
January, 2021
8
March, 2020
7
November, 2018
6
September, 2017
5
March, 2019
5
October, 2017
4
July, 2018
4
June, 2019
3
August, 2021
2
July, 2019
2
May, 2019
1
August, 2022
Available data
130
bigWig
127
bam
127
fastq
tsv
32
bed narrowPeak
19
bed bed3+
16
tagAlign
14
bigBed narrowPeak
12
bed broadPeak
Organism
51
Homo sapiens
Biosample type
58
tissue
primary cell
Organ
125
connective tissue
58
pancreas
57
adipose tissue
54
liver
26
musculature of body
Project
58
AMP
Genome assembly (visualization)
41
hg19
34
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
4
inconsistent control read length
1
inconsistent assembly
files.file_type!
tsv
biosample_type!
primary cell
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
1
1
pancreas
14
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