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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
Assay category
7
3D chromatin structure
Date released
3
October, 2022
2
November, 2019
1
August, 2021
1
March, 2020
Available data
833
bam
754
bigWig
471
fastq
tsv
397
bed narrowPeak
195
bigBed narrowPeak
107
bed bed3+
99
bed broadPeak
85
bigBed broadPeak
80
zippedFastqFolder
68
txt
64
xls
19
tagAlign
10
bed bedMethyl
10
bigBed bedMethyl
8
hic
7
bedpe bed3+
5
csv
3
cool
1
bedpe
1
hdf5
Organism
7
Homo sapiens
Biosample type
3
primary cell
3
tissue
1
cell line
Organ
7
pancreas
5
epithelium
3
heart
2
blood vessel
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
0
kidney
Project
4
AMP
3
HPAP
Genome assembly (visualization)
6
hg19
Lab
3
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
3
audit script error
1
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
7 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
2
pancreas
1
cell line
EndoC_BH1
1
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