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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
32
ChIP-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
44
DNA accessibility
32
DNA binding
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
broad histone mark
17
control
15
narrow histone mark
Date released
35
October, 2019
32
June, 2019
6
February, 2021
5
July, 2019
3
May, 2019
Available data
80
bam
58
bed narrowPeak
57
bigWig
50
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
81
Homo sapiens
Biosample type
81
tissue
Organ
575
liver
451
pancreas
324
epithelium
315
kidney
190
brain
168
heart
162
connective tissue
123
vasculature
117
blood vessel
101
bone element
81
limb
70
adipose tissue
69
artery
69
blood
69
bodily fluid
67
musculature of body
56
eye
22
nerve
20
spleen
19
embryo
19
lung
18
ureter
16
skeleton
13
vein
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
81
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
81 results
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DNase-seq
ChIP-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
2
19
1
muscle of arm
17
muscle of leg
13
3
1
tibial artery
2
9
1
gastrocnemius medialis
4
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