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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
Hi-C
1
WGBS
Assay category
49
DNA binding
44
DNA accessibility
4
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
control
15
narrow histone mark
Date released
49
October, 2019
32
June, 2019
6
February, 2021
6
May, 2019
5
July, 2019
Available data
97
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
98
Homo sapiens
Biosample type
98
tissue
Organ
509
liver
476
pancreas
338
epithelium
318
kidney
232
brain
171
connective tissue
165
heart
146
vasculature
141
blood vessel
101
bone element
98
limb
81
musculature of body
74
artery
66
adipose tissue
63
blood
63
bodily fluid
55
eye
27
nerve
20
vein
19
lung
18
ureter
16
embryo
16
skeleton
16
spleen
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
98
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
98
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
target.investigated_as!
control
BIOSAMPLE
ASSAY
98 results
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ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
24
2
1
tibial artery
18
2
1
muscle of leg
6
13
1
muscle of arm
17
gastrocnemius medialis
4
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