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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
14
total RNA-seq
6
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
33
DNA accessibility
14
Transcription
6
DNA binding
1
DNA methylation
Target of assay
4
histone
4
histone modification
4
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
23
October, 2019
7
June, 2019
1
July, 2019
Available data
34
bed narrowPeak
8
bam
7
bigWig
6
bigBed narrowPeak
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign
Organism
58
Homo sapiens
Biosample type
53
tissue
5
primary cell
Organ
535
liver
529
pancreas
368
epithelium
323
kidney
260
brain
225
heart
206
connective tissue
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
58
AMP
Genome assembly (visualization)
35
hg19
7
GRCh38
Lab
58
AMP-T2D consortium
files.file_type!
tsv
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
islet of Langerhans
2
14
2
4
retina
15
3
pigmented layer of retina
12
pituitary gland
1
primary cell
retinal pigment epithelial cell
3
1
1
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