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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
13
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
31
DNA accessibility
13
Transcription
6
DNA methylation
Date released
213
August, 2021
198
February, 2023
175
May, 2022
129
August, 2017
122
May, 2021
64
October, 2019
59
September, 2020
58
May, 2020
54
February, 2021
48
March, 2020
47
September, 2023
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
3
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bam
559
tsv
551
bigWig
txt
45
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
54
Homo sapiens
Biosample type
45
primary cell
4
in vitro differentiated cells
4
tissue
1
cell line
Organ
6
epithelium
6
pancreas
4
connective tissue
3
kidney
2
liver
Project
45
HPAP
9
AMP
Genome assembly (visualization)
5
hg19
Lab
45
Klaus Kaestner, Upenn
9
AMP-T2D consortium
Audit category:
27
audit script error
files.file_type!
txt
bam
BIOSAMPLE
ASSAY
54 results
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Clear Filters
snATAC-seq
single cell RNA-seq
WGBS
ATAC-seq
snDrop-seq
pCHi-C
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
in vitro differentiated cells
adipocyte
4
tissue
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
liver
1
cell line
HepG2
1
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