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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
75
ATAC-seq
52
ChIP-seq
51
single cell RNA-seq
11
total RNA-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
11
Transcription
Date released
6
October, 2019
5
July, 2019
Available data
txt
11
bam
11
bigWig
11
tsv
Organism
11
Homo sapiens
Biosample type
6
primary cell
4
cell line
1
tissue
Organ
474
connective tissue
398
adipose tissue
397
pancreas
189
liver
131
epithelium
72
heart
61
blood vessel
61
vasculature
58
bone element
56
artery
19
eye
17
brain
14
embryo
11
kidney
7
limb
6
musculature of body
5
nerve
1
pericardium
1
spinal cord
Project
11
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
11
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
txt
vcf
BIOSAMPLE
ASSAY
11 results
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total RNA-seq
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
+ See 1 more…
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
tissue
metanephros
1
See all biosamples
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