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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
4
DNase-seq
2
ChIP-seq
Assay category
31
DNA accessibility
5
Transcription
2
DNA binding
Target of assay
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
31
February, 2023
6
June, 2019
1
February, 2020
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
38
Homo sapiens
Biosample type
35
tissue
3
primary cell
Organ
631
pancreas
615
liver
553
connective tissue
414
adipose tissue
359
heart
307
epithelium
229
brain
202
kidney
201
vasculature
197
blood vessel
132
artery
99
limb
69
musculature of body
66
bone element
54
blood
54
bodily fluid
38
eye
32
nerve
28
embryo
18
ureter
15
spleen
13
vein
8
skeleton
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
38
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
38
AMP-T2D consortium
files.file_type!
txt
BIOSAMPLE
ASSAY
38 results
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ATAC-seq
total RNA-seq
DNase-seq
ChIP-seq
tissue
retina
15
3
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
2
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