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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
Assay category
5
3D chromatin structure
Date released
3
October, 2022
November, 2019
1
March, 2019
1
March, 2020
Available data
636
bam
592
bigWig
471
fastq
397
tsv
183
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
txt
5
bedpe bed3+
5
hic
3
cool
1
bedpe
1
hdf5
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Organ
5
epithelium
5
pancreas
3
blood vessel
3
heart
3
vasculature
2
liver
2
musculature of body
2
vein
1
kidney
Project
3
HPAP
2
AMP
Genome assembly (visualization)
5
hg19
Lab
3
Klaus Kaestner, Upenn
1
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
3
audit script error
files.file_type!
txt
month_released!
November, 2019
BIOSAMPLE
ASSAY
5 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
1
pancreas
1
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