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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
26
total RNA-seq
14
ATAC-seq
4
single cell RNA-seq
1
pCHi-C
Assay category
32
DNA binding
30
Transcription
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
626
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
262
August, 2021
218
June, 2019
198
February, 2023
193
May, 2022
168
July, 2018
120
May, 2019
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
Available data
77
fastq
75
bam
75
bigWig
46
bed narrowPeak
29
tsv
14
bigBed narrowPeak
1
bedpe bed3+
1
csv
Organism
77
Homo sapiens
Biosample type
76
primary cell
1
in vitro differentiated cells
Organ
75
pancreas
64
epithelium
1
adipose tissue
1
connective tissue
Project
77
AMP
Genome assembly (visualization)
75
GRCh38
75
hg19
Lab
77
AMP-T2D consortium
Audit category:
32
missing controlled_by
files.file_type!
txt
month_released!
July, 2019
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
pCHi-C
primary cell
pancreatic ductal cell
13
4
4
pancreatic alpha cell
10
3
2
pancreatic acinar cell
8
2
3
1
pancreatic beta cell
10
4
pancreatic endocrine cell
11
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in vitro differentiated cells
white fat cell
1
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