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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
150
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
70
transcription factor
60
histone
60
histone modification
37
broad histone mark
25
RNA binding protein
23
narrow histone mark
20
control
16
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
578
February, 2021
397
November, 2017
352
August, 2017
280
October, 2019
258
August, 2021
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
115
May, 2019
110
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
63
March, 2020
61
November, 2019
59
May, 2022
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
Available data
166
bam
145
bigWig
138
bed narrowPeak
137
bigBed narrowPeak
87
fastq
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
167
Homo sapiens
Biosample type
106
tissue
61
cell line
primary cell
Organ
57
heart
53
liver
23
kidney
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
167
AMP
Genome assembly (visualization)
143
GRCh38
136
hg19
Lab
167
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
txt
biosample_type!
primary cell
BIOSAMPLE
ASSAY
167 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
spleen
6
1
2
+ See 6 more…
cell line
HepG2
45
1
GM12878
15
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