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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
128
DNA binding
10
DNA accessibility
Target of assay
68
transcription factor
60
histone
60
histone modification
37
broad histone mark
24
RNA binding protein
23
narrow histone mark
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
63
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
166
bam
145
bigWig
138
bed narrowPeak
137
bigBed narrowPeak
88
fastq
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
138
Homo sapiens
Biosample type
82
tissue
56
cell line
Organ
51
liver
47
heart
18
kidney
12
blood
12
bodily fluid
4
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
138
AMP
Genome assembly (visualization)
136
GRCh38
136
hg19
Lab
138
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
txt
BIOSAMPLE
ASSAY
138 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
heart left ventricle
29
kidney
18
heart right ventricle
11
heart
7
liver
4
2
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cell line
HepG2
44
GM12878
12
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