Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
single cell RNA-seq
24
ChIP-seq
15
total RNA-seq
Assay category
63
Transcription
24
DNA binding
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
107
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
Available data
87
bam
87
fastq
79
bigWig
63
tsv
16
bed narrowPeak
Organism
87
Homo sapiens
Biosample type
tissue
48
primary cell
39
in vitro differentiated cells
Organ
37
pancreas
33
epithelium
13
embryo
2
connective tissue
Project
87
AMP
Genome assembly (visualization)
79
GRCh38
79
hg19
Lab
87
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
2
inconsistent control read length
files.file_type!
txt
biosample_type!
tissue
BIOSAMPLE
ASSAY
87 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
See all biosamples
Download