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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ATAC-seq
41
WGBS
34
single cell RNA-seq
21
snATAC-seq
20
total RNA-seq
5
GRO-seq
Assay category
101
DNA accessibility
54
Transcription
41
DNA methylation
Date released
626
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
314
October, 2019
262
August, 2021
218
June, 2019
198
February, 2023
193
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
29
fastq
28
bigWig
24
bam
txt
1
bed bed3+
Organism
201
Homo sapiens
Biosample type
134
primary cell
61
tissue
4
in vitro differentiated cells
1
cell line
1
stem cell
Organ
98
pancreas
80
epithelium
40
liver
2
musculature of body
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
embryo
Project
134
HPAP
67
AMP
Genome assembly (visualization)
41
hg19
5
hg18
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
9
AMP-T2D consortium
files.file_type!
txt
BIOSAMPLE
ASSAY
201 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
total RNA-seq
GRO-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
skeletal muscle tissue
1
1
adipose tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
GM12878
1
stem cell
hESC
1
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