Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
DNase-seq
56
ChIP-seq
5
total RNA-seq
Assay category
186
DNA accessibility
56
DNA binding
5
Transcription
Target of assay
26
histone
26
histone modification
18
transcription factor
14
narrow histone mark
12
broad histone mark
12
control
10
RNA binding protein
6
chromatin remodeller
Date released
406
November, 2017
399
May, 2021
354
August, 2017
341
May, 2020
313
October, 2019
261
August, 2021
240
February, 2021
217
June, 2019
197
February, 2023
193
May, 2022
168
July, 2018
120
May, 2019
96
July, 2019
94
December, 2017
87
November, 2018
80
April, 2019
73
September, 2018
63
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
14
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
3
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
Available data
247
bam
235
bigWig
230
bed narrowPeak
230
bigBed narrowPeak
186
bed bed3+
186
bed broadPeak
186
bigBed broadPeak
30
fastq
5
tsv
Organism
247
Homo sapiens
Biosample type
169
tissue
55
primary cell
23
cell line
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
epithelium
18
blood
18
bodily fluid
18
connective tissue
18
ureter
7
eye
7
liver
7
spleen
7
vasculature
5
blood vessel
4
pancreas
2
artery
adipose tissue
Project
247
AMP
Genome assembly (visualization)
235
GRCh38
212
hg19
Lab
247
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
files.file_type!
txt
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
247 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
cell line
GM12878
18
HepG2
5
See all biosamples
Download