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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
7
total RNA-seq
4
Hi-C
WGBS
Assay category
66
DNA binding
DNA accessibility
7
Transcription
4
3D chromatin structure
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
63
October, 2019
7
May, 2019
4
July, 2019
3
February, 2020
Available data
69
bam
52
bigWig
48
bed narrowPeak
48
bigBed narrowPeak
7
tsv
Organism
77
Homo sapiens
Biosample type
77
tissue
Organ
756
liver
722
pancreas
644
connective tissue
477
adipose tissue
354
epithelium
308
heart
249
brain
191
kidney
176
vasculature
172
blood vessel
147
bone element
92
artery
77
limb
60
blood
60
bodily fluid
60
musculature of body
40
nerve
37
embryo
29
eye
21
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
52
hg19
51
GRCh38
Lab
77
AMP-T2D consortium
files.file_type!
vcf
assay_title!
WGBS
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
total RNA-seq
Hi-C
tissue
tibial nerve
35
5
tibial artery
23
1
muscle of leg
7
gastrocnemius medialis
1
4
islet of Langerhans
1
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