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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
pCHi-C
16
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
42
DNA binding
16
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
258
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
93
October, 2019
80
May, 2020
66
May, 2021
59
September, 2020
47
September, 2023
40
May, 2024
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
March, 2020
2
November, 2019
1
August, 2022
1
October, 2022
1
September, 2018
Available data
1
bam
1
tagAlign
Organism
66
Homo sapiens
Biosample type
43
in vitro differentiated cells
16
cell line
6
primary cell
1
tissue
Organ
18
pancreas
17
epithelium
Project
66
AMP
Genome assembly (visualization)
hg19
276
GRCh38
Lab
43
Kyle Gaulton, UCSD
23
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
files.file_type!
vcf
assay_title!
pCHi-C
assembly!
hg19
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
cell line
EndoC_BH1
16
primary cell
monocyte
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
tissue
pancreas
1
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