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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
pCHi-C
Assay category
14
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
1
January, 2019
1
October, 2017
Available data
18
bam
18
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
18
tissue
Organ
794
pancreas
685
liver
601
connective tissue
457
adipose tissue
431
epithelium
322
kidney
293
heart
164
vasculature
159
blood vessel
158
bone element
121
artery
97
brain
73
limb
68
blood
68
bodily fluid
62
musculature of body
54
eye
25
embryo
19
lung
19
nerve
18
spleen
18
ureter
16
skeleton
7
vein
2
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
18
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
18
AMP-T2D consortium
files.file_type!
vcf
assay_title!
pCHi-C
target.investigated_as!
histone
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
14
2
1
1
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