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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
16
small RNA-seq
14
RRBS
11
WGBS
6
ATAC-seq
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
25
DNA methylation
19
Transcription
8
DNA accessibility
4
3D chromatin structure
Target of assay
3
control
Date released
406
November, 2017
296
August, 2017
284
October, 2019
244
August, 2021
217
May, 2021
175
June, 2019
172
May, 2022
170
February, 2021
151
May, 2020
113
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
56
July, 2019
48
July, 2018
47
September, 2018
47
September, 2023
46
March, 2020
43
April, 2018
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
38
bigWig
35
bam
21
bed bedMethyl
21
bigBed bedMethyl
19
tsv
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
56
Homo sapiens
Biosample type
40
tissue
16
primary cell
Organ
15
heart
14
brain
8
epithelium
musculature of body
7
vasculature
6
blood vessel
6
kidney
6
liver
5
connective tissue
5
limb
4
pancreas
3
adipose tissue
1
artery
1
eye
1
pericardium
Project
56
AMP
Genome assembly (visualization)
44
hg19
32
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
vcf
assay_title!
total RNA-seq
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
56 results
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Clear Filters
small RNA-seq
RRBS
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
right lobe of liver
2
1
aorta
2
body of pancreas
2
frontal cortex
1
1
+ See 21 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 10 more…
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