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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
2
Capture-C
Assay category
7
DNA accessibility
Date released
4
August, 2021
3
February, 2023
2
March, 2019
Available data
5
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
2
bed bed3+
1
bam
1
bed broadPeak
1
fastq
Organism
9
Homo sapiens
Biosample type
7
in vitro differentiated cells
2
tissue
Organ
4
connective tissue
2
pancreas
Project
9
AMP
Genome assembly (visualization)
8
hg19
1
GRCh38
Lab
3904
AMP-T2D consortium
142
Katalin Susztak, Upenn
107
Kyle Gaulton, UCSD
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
37
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
files.file_type!
vcf
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
Capture-C
in vitro differentiated cells
adipocyte
1
1
osteoblast
1
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
islet of Langerhans
2
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