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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
151
ChIP-seq
Assay category
151
DNA binding
Target of assay
transcription factor
77
histone
77
histone modification
71
control
65
recombinant protein
44
broad histone mark
33
narrow histone mark
32
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
710
February, 2021
383
May, 2021
354
August, 2017
341
May, 2020
307
August, 2021
307
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
151
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
64
March, 2020
60
November, 2019
60
October, 2018
59
September, 2020
49
April, 2018
47
September, 2023
45
December, 2017
37
February, 2018
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
138
bam
83
bigWig
69
fastq
68
bed narrowPeak
67
bigBed narrowPeak
67
tagAlign
12
bed broadPeak
6
bigBed broadPeak
Organism
151
Homo sapiens
Biosample type
82
tissue
63
cell line
6
primary cell
Organ
88
brain
63
liver
4
epithelium
4
vasculature
2
blood vessel
Project
151
AMP
Genome assembly (visualization)
67
GRCh38
32
hg19
Lab
151
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
files.file_type!
vcf
target.investigated_as!
transcription factor
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
151 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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cell line
HepG2
63
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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