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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
27
snATAC-seq
Assay category
563
Transcription
56
DNA accessibility
8
DNA binding
6
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
18
August, 2021
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
34
fastq
18
bam
18
bed narrowPeak
8
bigWig
4
bed bedgraph
2
bed bed3
Organism
56
Homo sapiens
Biosample type
35
primary cell
9
cell line
8
tissue
4
in vitro differentiated cells
Organ
8
artery
8
blood vessel
8
bone element
8
heart
8
skeleton
8
vasculature
7
epithelium
7
pancreas
6
limb
5
connective tissue
1
liver
Project
34
HPAP
22
AMP
Genome assembly (visualization)
25
GRCh38
22
hg19
Lab
34
Klaus Kaestner, Upenn
22
AMP-T2D consortium
Audit category:
27
audit script error
1
inconsistent replicate
files.file_type!
xls
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
snATAC-seq
primary cell
Langerhans cell
27
pancreatic alpha cell
5
pancreatic beta cell
2
osteoblast
1
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
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in vitro differentiated cells
adipocyte
4
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