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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
RRBS
12
WGBS
8
Hi-C
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
65
Transcription
12
DNA methylation
8
3D chromatin structure
2
DNA accessibility
Target of assay
3
control
Date released
693
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
292
October, 2019
243
August, 2021
241
May, 2020
218
June, 2019
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
94
December, 2017
88
November, 2018
87
July, 2019
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
15
October, 2017
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
Available data
79
bigWig
76
bam
65
tsv
8
bed bedMethyl
8
bigBed bedMethyl
4
bed bed3+
4
hdf5
2
bed narrowPeak
2
bigBed narrowPeak
Organism
87
Homo sapiens
Biosample type
65
tissue
22
primary cell
Organ
19
heart
17
connective tissue
15
brain
12
adipose tissue
9
blood vessel
9
liver
9
musculature of body
9
vasculature
7
epithelium
7
kidney
5
limb
4
pancreas
2
artery
1
pericardium
Project
87
AMP
Genome assembly (visualization)
73
GRCh38
71
hg19
Lab
87
AMP-T2D consortium
files.file_type!
xls
assay_title!
RRBS
ATAC-seq
BIOSAMPLE
ASSAY
87 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 20 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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