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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
DNase-seq
6
ChIP-seq
Assay category
10
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
6
June, 2019
6
October, 2019
4
November, 2017
Available data
184
bam
154
bigWig
132
bed narrowPeak
82
bigBed narrowPeak
68
tsv
16
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
16
Homo sapiens
Biosample type
11
primary cell
5
tissue
Organ
77
kidney
63
liver
47
brain
45
musculature of body
35
limb
29
heart
21
epithelium
21
pancreas
18
ureter
16
vasculature
13
blood vessel
9
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
16
AMP
Genome assembly (visualization)
15
hg19
14
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
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xls
audit.ERROR.category!
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BIOSAMPLE
ASSAY
16 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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