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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
13
histone
13
histone modification
9
narrow histone mark
6
transcription factor
4
broad histone mark
2
chromatin remodeller
Date released
16
August, 2017
December, 2017
2
February, 2018
1
October, 2018
Available data
19
bam
19
bed narrowPeak
19
bigWig
19
fastq
7
bigBed narrowPeak
4
bed bed3+
Organism
19
Homo sapiens
Biosample type
cell line
8
in vitro differentiated cells
6
tissue
5
primary cell
Organ
9
pancreas
6
connective tissue
4
epithelium
1
liver
Project
19
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
19
AMP-T2D consortium
Audit category:
19
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
files.file_type!
xls
biosample_type!
cell line
month_released!
December, 2017
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
2
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
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