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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
DNase-seq
1
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
17
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
21
October, 2019
March, 2020
1
May, 2021
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
hic
1
tar
Organism
22
Homo sapiens
Biosample type
22
primary cell
Organ
932
pancreas
788
liver
682
connective tissue
518
epithelium
490
adipose tissue
386
heart
288
kidney
284
brain
232
vasculature
226
blood vessel
159
bone element
141
artery
122
limb
91
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
24
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
21
AMP
1
T1D
Genome assembly (visualization)
16
hg19
12
GRCh38
Lab
21
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
audit script error
files.file_type!
xls
month_released!
March, 2020
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
DNase-seq
FAIRE-seq
Hi-C
pCHi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
megakaryocyte
1
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